PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIUR3_18508-P1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family bHLH
Protein Properties Length: 88aa    MW: 9871.14 Da    PI: 9.3634
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIUR3_18508-P1genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH27.17.5e-0914551554
                     HHHHHHHHHHCTSCC.C....TTS-STCHHHHHHHHHHHHHH CS
              HLH 15 riNsafeeLrellPk.as.kapskKlsKaeiLekAveYIksL 54
                     +iN+ +++L++llP+ +  + +s   s   +L++++ YIksL
  TRIUR3_18508-P1 14 EINELISRLQTLLPTtRRrGSSSSPASTTKMLKETCSYIKSL 55
                     7**************6556666666****************9 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS508889.153155IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003539.1E-4961IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamilySSF474592.22E-91275IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.102.5E-91459IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000103.5E-61455IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 88 aa     Download sequence    Send to blast
MSGRRSRGSV SEEEINELIS RLQTLLPTTR RRGSSSSPAS TTKMLKETCS YIKSLHREVD  60
DLSDRLSDLM STMDNNSPAA EIIRSLLR
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqNP_001148242.13e-43uncharacterized protein LOC100281850
SwissprotQ6YUX03e-40ILI5_ORYSJ; Transcription factor ILI5
SwissprotA2X9L83e-40ILI5_ORYSI; Transcription factor ILI5
TrEMBLT1ML207e-56T1ML20_TRIUA; Uncharacterized protein
STRINGMLOC_55094.11e-41(Hordeum vulgare)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP92838145